Showing 4 results for Landmark
Aghil Mansouri Khajeh Langi, Iraj Hashemzadeh Segherloo, Seyedeh Narjes Tabatabaei, Asghar Abdoli,
Volume 3, Issue 4 (3-2017)
Abstract
Garra rufa is one of the 73 Garra species of the family Cyprinidae. Scales are used more commonly than any other structure in population dynamic studies, because of their transparency, ease of sampling, and the minimal in-juries caused to the fish during their removal. To discriminate fish from different rivers including Bashar, Behbahan, Gerdab, Kheirabad, Kooshk-e-Bahram, Mazoo, Palangan, Sendegan, Shoor-Abad, and Sirvan Rivers using geometric morphometric analyses of the scale shape, landmark based geometric morphometrics method was used. Seven landmark points were depicted on each scale using the software TpsDig2. After procrustes analyses, landmark data were exposed to principle component analysis (PCA), CVA, and cluster analyses using the past software. The results showed that th-ere were significant scale shape differences among some populations, but most of the samples showed overlapping sh-ape distribution and could not be separated robustly. Among the samples which were analyzed, only the Sendegan and Gerdab river samples did not show significant difference in scale shape compared to all other samples.
Ata Mouludi-Saleh, Yazdan Keivany,
Volume 5, Issue 2 (9-2018)
Abstract
. In this study, morphological variation of three species of Squalius in Iranian basins was studied. For this purpose, 709 specimens were captured from the Caspian Sea, the Urmia Lake, the Namak Lake and the Tigris basin. After anesthetizing in clove oil solution and fixing in 10% neutralized formalin, specimens were transferred to the Isfahan University of Technology Ichthyology Museum (IUT-IM) for further studies. In the laboratory, some 14 meristic characters were counted under a streomicroscope. Also, images were analyzed with ImageJ software and 19 morphometric characteristics were measured. In addition, 13 landmarks were defined and digitized on images taken in tpsDig2 software in order to extract geometric morphometric data. Kolmogorov-Smirnov, Kruskal-Wallis, ANOVA, Duncan test, PCA, CVA and cluster analysis methods were used to analyze the differences among the populations. The results of PCA and CVA meristic and morphometric analyses showed no significant differences among the studied populations. The populations of the species studied were significantly different in 11 meristic and 15 morphometric characteristics. Also, the major differences observed in the results of geometric morphometric analysis were related to the position of the pectoral fin, body and head depth. In general, the studied populations highly overlapped, and we suggest that the populations of genus Squalius should be further studied by molecular methods.
Atta Mouludi-Saleh, Soheil Eagderi, Shima Latif-Nejad, Manoochehr Nasri,
Volume 7, Issue 2 (7-2020)
Abstract
This study was conducted to understand the morphological variation of four populations of Schizothorax pelzami from Iranian inland waters. For this purpose, a total of 81 specimens were collected from the Bidvaz, Cheshmeh-Ali, Kalat and Aal rivers. After anesthesia, all specimens were fixed into buffered formalin and transferred to the laboratory. Then, the left sides of all individuals were photographed. To extract the body shape data, 14 landmarks-points were defined and digitized on 2D image using TpsDig2 software. To eliminate size, direction and position from data, the Generalized Procrustes Analysis (GPA) was performed. Then, PCA, MANOVA/CVA and cluster analysis were used for further investigation. The results showed that there was no significant difference but some overlapping among the studied populations on the basis of PCA analysis was observed. The CVA graph separated the studied populations from on another. The main differences in body shape of the studied populations were related to the position of the snout, the depth of head and body, and the length of caudal peduncle. The observed changes can be considered to be an adaptation to their habitat, which has been influenced by different environmental parameters.
Roghaieh Zarei, Mahvash Seifali,
Volume 7, Issue 3 (11-2020)
Abstract
The aim of this study was to determine the variations among cephalic plates of individuals in two populations of Clinopodes flavidus in Alborz Mountains, by means of landmark-based techniques of geometric morphometrics. Therefore, 17 landmarks and semi-landmarks on the coxosternite of poison claw and seven landmarks and semi-landmarks on the tarsangulum of poison claw were selected using TpsDig2 software. Data of landmarks, after procrust analysis, were subjected to various multivariate analyses, such as Principle Component Analysis (PCA) and Canonical Variate Analysis (CVA) by means of PAST and MorphoJ softwares. The results obtained demonstrated that shape variations in coxosternite were significantly different among various populations (p<0.001). This study revealed the usefulness of landmark-based geometric morphometrics in the differentiation of various populations of Clinopodes flavidus in Alborz Mountains.