Showing 400 results for Type of Study: Original Article
Mahboobe Mohebi Bijarpas, Teymuor Rostami Shahraji, Habiboala Samizadeh Lahiji,
Volume 5, Issue 2 (9-2018)
Abstract
To understand the Eco physiological adaptation mechanisms of Fagus orientalis Lipesk to altitude changes, the activities of Peroxidase (POD), Catalase (CAT), and Ascorbate peroxidase (APX) in leaves of Fagus orientalis in different altitudes (A1: 700 m, A2: 1200 m, A3: 1700 m above sea level) Was studied in the forests of Guilan. The sampling of leaves was collected from southern and northern parts of the crown of healthy and mature trees. The results of analysis variance showed that there was a significant difference between and within the population for the activity of catalase and peroxidase enzymes at the probability level of 0.05 and with increasing altitude, the activity of catalase and peroxidase were increased but the activity of Ascorbate peroxidase enzyme was initially increased and its level of activity decreased from the middle altitude with increasing altitude. Also, the results showed that the enzymatic activity of peroxidase and catalase in the northern leaves was more than the southern leaves that collected in crown of the trees.
Seyedeh Mahdieh Sadadt, Zahra Hajihassan, Mohammad Barshan-Tashnizi, Mehri Abdi,
Volume 5, Issue 3 (12-2018)
Abstract
Nerve growth factor (NGF) is a neurotrophic factor that is functional in the survival, maintenance and differentiation of nervous system cells. This protein has three subunits, of which the beta subunit has the main activity. Its structure consists of a cysteine knot motif made up of beta strands linked by disulfide bonds. It can be used as a therapeutic agent in the treatment of many diseases. As NGF extracted from natural sources is unsuitable for therapeutic goals, many studies have attempted to produce recombinant β-NGF. In this study, Trigger Factor (TF) chaperone was expressed simultaneously with β-NGF in E. coli in order to obtain increased yield of soluble recombinant human β-NGF. For this purpose, pET39b (+)::β-NGF and chaperone plasmid pTf16 were transferred to E.coli (DE3 strain). After the induction of each promoter, the total proteins and periplasmic proteins were extracted. To confirm the effects of TF on total protein and soluble β-NGF expression level, Bradford and Dot blot techniques and ImageJ software were used. Then, β-NGF was purified using affinity chromatography column (Ni+2-NTA). Also, the PC12 cells were treated with the protein for one week in order to study the function of purified NGF. Our data indicated that co-expression of TF could increase the soluble and periplasmic production of β-NGF but not total proteins. Also, the treatment of PC12 cell line with purified β-NGF, co-expressed with TF chaperone, showed differentiation of these cells to nerve cells. This indicated that the purified NGF is fully functional. Our data suggest that the co-expression of cytoplasmic chaperone (TF) with recombinant nerve growth factor might be an efficient approach to produce a proper quantity of soluble and active rhNGF.
Esmat Khaleqsefat, Mohammad Khalaj-Kondori, Morteza Jabbarpour Bonyadi, Hamid Soraya, Behnam Askari,
Volume 5, Issue 3 (12-2018)
Abstract
Warfarin is a commonly-prescribed anticoagulant used to treat and prevent thromboembolic events. The requirement for varying doses of warfarin depends on genetic and environmental components. In this study, the frequency of two single-nucleotide polymorphic variants of the vitamin K epoxide reductase complex subunit 1 (VKORC1) gene (1173 C>T (rs9934438) and 3730 G>A (rs7294)) and its correlation with warfarin maintenance doses were investigated in patients with heart valve replacement from West Azarbayejan, Iran. Blood samples were obtained from 185 patients; their genomic DNA was extracted and samples were genotyped by polymerase chain reaction–restriction fragment length polymorphism (PCR-RFLP) assay. To assess if the blood warfarin level is different among genotypes, we used a one-way analysis of variance (ANOVA) followed by a Tukey’s post-hoc comparison. The minor allele frequency was determined to be 54% for 1173T and 53.7% for 3730A. Patients who carried the G allele at position 3730 and T allele at position 1173 required a significantly lower daily mean warfarin dosage (P <0.001). Consideration of the VKORC1 gene polymorphism, especially at the initial stages of the therapy, can be helpful in pre-treatment dosing of warfarin, which, in turn, reduces the adverse effects resulting from inappropriate drug prescription.
Mina Khorasani, Shahryar Saeidi Mehrvarz, Shahin Zarre,
Volume 5, Issue 3 (12-2018)
Abstract
Allium ampeloprasum (Amaryllidaceae) is recorded as a new taxon for the flora of Iran. It is morphologically most similar to Allium atroviolaceum and Allium iranicum. This species is compared with its two aforementioned relative species and some notes are given on its affinities. A full description, images and a distribution map are also provided. In addition, a lectotype is selected for A. atroviolaceum.
Leila Mamizadeh, Alireza Naghinejad,
Volume 5, Issue 3 (12-2018)
Abstract
In the framework of floristic and vegetation studies of different parts of the Hyrcanian region of northern Iran, Lepidium virginicum L. (Brassicaceae) is reported here for the first time for the flora of Iran. Along with a distribution map for the species, an identification key is provided for the nine annual or biennial species of Lepidium, already reported from Iran.
Khadijeh Mahmoodi, Maneezheh Pakravan, Valiollah Mozaffarian,
Volume 5, Issue 3 (12-2018)
Abstract
The genus Zoegea L. belongs to Asteraceae family and has about 10 species in the world. This genus is considered to be an Irano-Turanian and Mediterranean element and is distributed in south-western and central Asia and in the central, southern, north-western and south-western parts of Iran as well. The subspecies classification of the genus is not consensus and various classifications could be found in different taxonomy resources. In this study various specimens from different regions of Iran were studied. In addition, anatomical and palynological characters were used to perform a cluster analysis in order to determine species groups. In the end, our results confirmed that Z. baldschuanica and Z. glabricaulis were distinct species.
Mohammad Sadegh Amiri, Shahryar Saeidi Mehrvarz, Farshid Memariani,
Volume 5, Issue 3 (12-2018)
Abstract
Plantago lagocephala is recorded as a new species for the flora of Iran from Razavi Khorassan Province. It is compared with the closely related species including P. lachnantha, P. ciliata and P. psammophila. Moreover, the diagnostic morphological characters and a distribution map are provided. The conservation status of the new record is evaluated based on the IUCN red list categories and criteria.
Farideh Attar, Valiollah Mozaffarian, Mansour Mirtadzadini,
Volume 5, Issue 3 (12-2018)
Abstract
Cousinia elymaitica, which has been collected from western Iran, is described in this paper as a new species. This new species has been assigned to the sect. Pugioniferae on the basis of its habit, purple corolla and decurrent leaves. Its closest related species is C. macroptera. A distribution map and an illustration of the related specimens have also been provided.
Atiye Nejad Falatoury, Mostafa Assadi,
Volume 5, Issue 3 (12-2018)
Abstract
Gypsophila hispida, sect. Hispidae, is reported for the first time from NW Iran. Illustrations, morphological and palynological descriptions and distribution are provided in detail, along with a key for the six taxa of subgen. Hagenia from Iran.
Yasamin Nasseh, Mohammad Reza Joharchi,
Volume 5, Issue 3 (12-2018)
Abstract
During the study on the specimens of Astragalus sect. Ammodendron in the herbarium of Ferdowsi University of Mashhad (FUMH), based on the last and most recent sources, two new species, i.e. A. microfoliolatus sp. nova and A. rashed-mohasseli sp. nova were found and described. Morphological evidence confirmed that the belonging of these taxa to Astragalus sect. Ammodendron. The most important differences between A. microfoliolatus and its closest relatives are leaflets with very small size and glabrescent legume. Also, the main distinctive characters ofA. rashed-mohasseli are the presence of hairs on the dorsal side of vexillum, oblong legume and short rachis. Hairy vexillum has been obseverd for the first time in this section. In addition, A. aiwadzhi is recorded as a new species for the flora of Iran. Taxonomic descriptions, illustrations and distribution maps are provided to expedite identification.
Fateme Sadeghipour, Navaz Kharazian, Saeid Afsharzadeh,
Volume 5, Issue 3 (12-2018)
Abstract
The Palang Galoun protected region, comprising 34935 hectares, is located 75 km northwest of Najaf Abad, and 102 km northwest of Isfahan city. The aim of this research was to assess the floristic spectrum, life form varieties, chorological analysis, determination of protected status and identification of medicinal, threatened species criteria and poisonous plants of this natural heritage. Plant samples were collected during different vegetative seasons at several stages. Life forms of samples were determined and chorological analysis was performed. On the basis of the obtained results, a total of 166 species belonging to 126 genera and 39 families were identified. Six families, 23 genera and 26 species belonged to monocotyledons, whereas 33 families, 103 genera and 140 species belonged to dicotyledons. In terms of chorological analysis, 58% of plant species were distributed in the Irano-Turanian region. It is noteworthy that 44 endemic species, 97 medicinal species, 48 pasture species and 23 poisonous species were present in the studied area. Life forms were found to comprise 54% hemicryptophytes, 24% therophytes, 10% geophytes, 7% chamaephytes and 5% phanerophytes. Based on IUCN red list categories and criteria, there were 22 species in the lower risk category and seven species categorized as vulnerable case.
Sajjad Farrokyar, Javad Baharara, Tayyebe Ramzani,
Volume 5, Issue 3 (12-2018)
Abstract
Nowadays natural compounds are increasingly used in various fields since they cause fewer adverse side effects than their chemical counterparts. In addition, preparation and production of natural compounds are comparatively simple. The present study aimed to evaluate the anti-cancer effects of brittle star methanol extract on MCF-7 cells. Anti-cancer effects of brittle star methanol extract were examined on the MCF-7 cell line. Moreover, the toxicity of this compound was assessed using cell apoptosis methods,
ethidium bromide/acridine orange (EB/AO) staining and Annexin V Apoptosis Detection Kit. According to the MTT assay, the methanolic extract of brittle star could prevent proliferation in a time- and dose-dependent manner. The calculated inhibitory concentration that decreased the cell-viability by half (IC
50) was estimated at 150 µg/ml. On the other hand, results of EB/AO staining were indicative of increased apoptotic cells in the treatment group. In addition, results of Annexin V/PI protocol demonstrated a significant enhancement in the percentage of late apoptotic cells (29.02%) in the treatment groups (150 µg/ml) and the percentage of necrotic cells were 2.77% for a period of 24 hours. According to the results, the methanolic extract of Persian Gulf brittle star induced apoptosis in the MCF-7 cell line. These effects could be attributed to the presence of certain active biological compounds, such as Saponins, Naphthoquinones and Carotenoids. Furthermore, our findings suggested that brittle star might have beneficial effects on cancer management. Therefore, this natural marine compound could be used as a complementary element in the prevention and treatment of cancer.
Mansour Mirtadzadini , Firouzeh Bordbar, Mohammad Reza Parishani, Ernst Vitek, Mohammad Reza Rahiminejad,
Volume 5, Issue 3 (12-2018)
Abstract
The current investigations suggest the segregation of Jurinea cartilaginea from Jurinea, and its placement among Centaureinae. Molecular studies, based on the nuclear ribosomal internal transcribed spacers (nrITS), chromosome number data and pollen morphology, support the morphological results. Based on these results, J. cartilaginea is related to and, therefore, transferred to the genus Karvandarina. Due to the morphological characters differing from Karvanderina aphylla, a new subgenus, Pseudojurinea, is described. Molecular study also supports the monophyly of Jurinea.
Firouzeh Bordbar, Mansour Mirtadzadini,
Volume 5, Issue 3 (12-2018)
Abstract
In this study, we investigated the chromosome numbers of some endemic species distributed in East and South-East Iran. The mitotic chromosome counts were presented for the first time for six species in three angiosperm families including: Linaria iranica (2n=12), Nanorrhinum campyloceras (2n=18), Chaenorhinum grossecostatum (2n=24) (Plantaginaceae), Gaillonia bruguieri (Rubiaceae) (2n=22), Nepeta rivularis and N. assurgens (Lamiaceae) (2n=18).
Mahboubeh Sheikhbahaei, Farkhondeh Rezanejad, Hossein-Ali Sasan,
Volume 5, Issue 4 (12-2018)
Abstract
The flowering process in plants proceeds through the induction of an inflorescence meristem triggered by several pathways. Many of the genes associated with these pathways encode transcription factors of the MADS domain family. The MADS-domain transcription factor APETALA1 (AP1) is a key regulator of flower development. The first step to understand the molecular mechanisms under the function of each gene in a plant is identification, sequencing and phylogeny analysis of that gene. For this purpose, total RNA was isolated from flower bud of garden cress (Lepidium sativum L.) and was used for cDNA synthesis. The specific primers were designed based on nucleotide sequence alignment of AP1 homologus genes from plants of the same family Brassicaceae and were used in RT-PCR. After observing its electrophoretic pattern and ensuring the quality of PCR product, the amplicon was sent for sequencing. After receiving the results of sequencing, the sequence examined with BLAST, MUSCLE, Gene Runner and MEGA6 softwares. The results indicated amplification of 787 nucleotides fragment that named LsAP1 and was recorded by accession number KP070728 in NCBI database. The studies show high similarity and overlapping of gene bank sequences with LsAP1 illative protein. According to these results, LsAP1 may play a similar role as AP1 in flower induction and could act as a flower meristem identity gene in Lepidium sativum L.
Azra Saboora, Maryam Amiri Rad, Ezat Asgarani, Tayebeh Radjabian,
Volume 5, Issue 4 (12-2018)
Abstract
DNA extraction from plant tissues often causes most problems. For example, unsuccessful removal secondary metabolites during extraction, such as phenolic compounds in aromatic and medicinal plants, cause to some mistakes in result of molecular experiments by using of the extracted DNA. Achillea wilhelmsii is a medicinal plant belong to Asteraceae family and native to Iran, there is little information about genomic data in this plant. Therefore, optimizing of the DNA extraction methods for obtaining suitable quality and quantity yield is necessary. In this study, two traditional DNA extraction methods (using fresh and herbarium leaf samples) and commercial DNA kit MAGNANTM in Yarrow have been compared. Results showed that DNA extracted from fresh leaves of yarrow according to Khanuja et al. (1999) was better than the other methods which mentioned in this research, because of the increased amount of extracted DNA and reduced harmful compounds such as RNA, polysaccharides, protein and secondary metabolites. To evaluate the quality of extracted DNA from herbarium specimens showed that, in spite of the high yielding DNA (10-50 fold ratio to the other methods), quality of this extract was low on agarose gel because of smear and broken down the molecules. It can be considered as a limitation of the extract in molecular experiments. Procedure of MAGNANTM DNA kit was appropriate for reducing time and cost of the extraction as well as low contamination to protein and RNA, but the process needs some modifications for yarrow to increase the amount of extracted DNA.
Mitra Mohammadi Bazargani,
Volume 5, Issue 4 (12-2018)
Abstract
Epilobium minutiflorum belongs to the genus Epilobium with important medicinal properties. In this study, the natural variation of phytochemical compounds of E. minutiflorum at different altitudes has been investigated. Aerial parts of plants were collected at flowering stage from natural habitats at different altitudes of 2387, 2569 and 2813 masl. The plant extracts were obtained with 80% methanol and several phytochemical properties were measured. The properties included the total flavonoid content (TFL), total phenol (TPH), antioxidant capacity (AOX) and anthocyanin content (ACY) measured by the AlCl3, the Folin-Ciocalteu, the Ferric reducing antioxidant power (FRAP) and the differential PH methods, respectively. In addition, phytochemical components were identified by the GC/MS method. The results of photometric analysis indicated that the population of Shemshak, located at the highest altitude showed the highest content of TFL, TPH and AOX with 30.39 mg/gr DW, 938.91 mg/gr DW and 77.77 mM/gr DW, respectively. The TFL, TPH and AOX values showed a positive correlation with altitude. The results of GC/MS analysis revealed the presence of 41 compounds in E. minutiflorum, which were separated into flavonoids, phenolic acid and its derivatives, steroids and terpenes groups. Shemshak population showed the highest value in all identified compounds. A positive correlation was also observed between altitude and 30 compounds identified by the GC/MS method including mainly flavonoids and phenolics. The results of this study indicated that environmental factors at higher altitudes may influence the elevation of the flavenols and phenol content in E. minutiflorum. The identification of these influential factors on phytochemical content at higher altitudes requires further studies.
Somayeh Keypour, Hossein Riahi, Mostafa Ebadi, Ali Borhani, Mohammad Reza Asef Shayan, Naser Safaie,
Volume 5, Issue 4 (12-2018)
Abstract
The genus Ganoderma belongs to Polyporales, well-known for its medicinal properties and as a plant pathogen. The aim of this study was to identify the genetic variation between populations of two Ganoderma lucidum Karst. complex isolates using RAPD. For this purpose, four populations of G. resinaceum Boud. and eight populations of G. lucidum collected and purified during 2011-2012, were studied for the first time in Iran. Ten random primers were used for RAPD reaction. The result for RAPD-PCR studies of G. lucidum complex showed a wide range of diversity, as scores of 61.48 and 40.16 were estimated for the inter-specific diversity of G. lucidum and G. resinaceum, respectively. Cluster analysis confirmed the separation of two species populations in different clusters. In the analysis of genetic structure, two probable groups (K = 2) were identified in the studied germplasm which was also confirmed by the results of bar plot.
Maryam ٍebrahimi, Khadijeh Kiarostami, Zahra Nazem Bokaee,
Volume 5, Issue 4 (12-2018)
Abstract
Melissa officinalis is a medicinal plant belong to lamiacea family. This plant has been cultivated in many parts of the world due to its therapeutic effects. This study was conducted to improve antioxidant activities of proliferated shoots from tissue culture. The seeds of plant were cultured in MS hormone free medium in order to obtain seedlings. Then the shoots were transfer to MS medium supplemented with 2 mg/ L BAP.After 45 days salicylic acid (SA) was added to the medium at concentrations of 0, 50, 100 and 200 µM. The antioxidant activity and phenolics, flavonoids and rosmarinic acid content in proliferated shoots were evaluated 4,7,10 and 14 days after treatment. As a result the highest free radical scavenging and reducing power activity, as well as the highest value of total phenolic and rosmarinic acid were observed in shoots after 14 days of treatment with 100 µM salicylic acid. The elevated level of superoxide anion scavenging activity and total flavonoids were obtained from the shoots treated with 50 µM salicylic acid for 14 days. Over all treatment with100 µM salicylic acid for 14 days was better in order to antioxidant activity and compounds with recognized antioxidant activity.
Morteza Naderi,
Volume 5, Issue 4 (12-2018)
Abstract
During a period from spring 2008 till fall 2010, Iranian Jerboa population abundance was estimated using distance (linear transect) and capture-recapture methods in the Mirabad plains near Shahreza city in Isfahan Province. In the study period, during the active time of the species except reproduction time, we tried to live-trap, mark, release and recapture individuals based on Schnabel method on different sampling occasions. Simultaneously, we also traversed line transects using motorcycle and spot-light by two observers in different habitat types. We tried to get uniform trapping nights in different lunar nights and different habitat types. The population abundance, using Schnabel and distance methods was estimated to be 226 and 402 individuals, respectively. With regard to the obtained results and species behavior, it seems that distance method yields more precise confidence limits of the estimation compared with capture-recapture method. However, capture-recapture method yields more precise estimates for closed populations because of its more limiting assumptions, but the confidence reliability of abundance estimation of a species depends on the species and its habitat selection behavior completely.