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Atiye Nejad Falatoury, Mostafa Assadi,
Volume 5, Issue 3 (12-2018)
Abstract

Gypsophila hispida, sect. Hispidae, is reported for the first time from NW Iran. Illustrations, morphological and palynological descriptions and distribution are provided in detail, along with a key for the six taxa of subgen. Hagenia from Iran.
 
Neshat Saffarzadeh, Hamid Moghimi,
Volume 6, Issue 1 (5-2019)
Abstract

Impranil DLN is a class of plastics belonging to the polyurethane family with high application in textile industries. The aim of this study was to evaluate the potential of native strain to degrade impranil DLN. In this study, yeast strains were isolated from different areas and purified in minimal medium containing 1% impranil. Isolate NS-10 was selected as the superior strain capable of degrading impranil and identified through PCR and ITS gene. Esterase, urease and protease assays were carried out for the superior strain. Finally, the biodegradation of impranil was investigated. In total, 40 yeast strains were isolated and isolate NS-10 was selected as a superior strain based on impranil removal assay. NS-10 strain was identified as Sarocladium kiliense with 100% homology. Enzymatic assays showed that the S.kiliense could produce esterase, urease and protease. In addition, it could produce significant clear zones on impranil plates. Degradation rate for impranil was 100% for 10 g/l within 14 days. Finally, S.kiliense was taken to medium containing pure polyurethane film and the capacity of degradation was investigated by the scanning electron microscopy. Our results indicated that S.kiliense is capable of degrading impranil. These results could contribute to a better insight into the mechanism of plastic biodegradation.
 
 


Fatemeh Rabizadeh, Hassan Zare-Maivan, Shahrokh Kazempour,
Volume 6, Issue 2 (8-2019)
Abstract

Astragalus semnanensis Bornm. & Rech. belongs to sect. Semnanensis, of thorny astragali and A. fridae, of non-thorny astragali, belongs to sect. Incani are the only endemic gypsophyllic species in western Semnan. The morphological and systematical studies available on these two species are scarce. Nor have the anatomical, distribution and adaptive capabilities in relation to soil and elevation of these species been investigated yet. Therefore, this study is aimed to comparatively investigate these features. The effect of soil and elevation on the anatomy, morphology and micro-morphology of the leaves of both species, as well as associated plant species, were analyzed using RDA and CCA analytical methods, Canoco 4.5 software. Comparison of RDA analysis of both species indicated that gypsum had the highest effect on the abundance of both species, while elevation had a strongly positive correlation with A. fridae and a negative correlation with A. semnanensis. Both species adsorb gypsum on their epidermis and part of the gypsum absorbed is accumulated in leaf parenchyma cells as calcium sulfate crystals. Adaptability of leaf surface is in the form of long and dense hairs which, in A. semnanensis, are longer and basifixed and, in A. fridae, thicker and medifixed. Increase in soil Ec and Na, K and Mg content and content of CaCO3 reduce both species abundances. Species such as Acantholimon cymosum and Prunus lycioides were found to be associated with A. semnanensis and species such as Moltkia gypsaceae and Euphorbia gypsicola with A. fridae.
 


Farshad Darvishi,
Volume 6, Issue 2 (8-2019)
Abstract

Lipase is used in the production of foods, flavor enhancers, detergents, cosmetics and pharmaceuticals. A common impediment to the production of commercial enzymes is their low-stability aqueous solutions. In this study, the downstream process was investigated to obtain a stable spray-dried lipase powder of Yarrowia lipolytica. The enzyme solution samples were supplemented with different concentrations of Arabic gum and milk powder to spray-drying. Samples were dried in a pilot spray dryer at inlet and outlet temperatures of 175 and 85 °C, respectively, at a flow rate of 15 liters per hour. The best lipase powder obtained from spray-drying with 3% of Arabic gum and 9% of milk powder formulation as compared with other formulations. Results showed that spray-dried lipase powders of Y. lipolytica had a good yield suitable for various applications.
 
 


Faezeh Asheqian, Sedigheh Kelij, Naser Jafari,
Volume 6, Issue 4 (1-2020)
Abstract

The purpose of this research was to identify the structural adaptations in three populations of Convolvulus persicus L. on coastal areas in Mazandaran Province, whose populations of which are severely reducing due to the intense environmental stresses of the coastal zone. In general, annular collenchyma, isobilateral mesophyll, amphiphloic siphonostele, abundant presence of laticiferous tubes, numerous druse crystals and the presence of periderm in rhizome can be introduced as the most important morpho-anatomical strategies utilized against harsh environmental conditions. Sari population was foud to have the most various structural toleration mechanisms in comparison with Babolsar and Nour populations. Few differences were observed in anatomical characteristics in the three populations of Convolvulus persicus as the evidence for high intra-specific phenotypic variability, leading to local adaptation and increase of the tolerability of plants against environmental changes.
 
 
Vida Tafakori, Nasim Nasiri,
Volume 6, Issue 4 (1-2020)
Abstract

Plants have been used as medicines in the treatment of diseases from the past to present. In this research, the anti-microbial effects of aqueous and methanolic extracts of Erythrostemon gilliesii were studied. For this purpose, fresh flowers were ground and then macerated in methanol 100% and water overnight. After the evaporation of solvents, anti-microbial activities of the concentrated extracts were evaluated by the well-diffusion method on Klebsiella pneumoniae, Pseudomonas aeroginosa, Methicilin resistance, Staphylococcus aureus, Bacillus subtilis and Candida albicans. The results showed that the extracts were effective on different bacteria and yeasts. In order to determine the minimum inhibitory concentration (MIC) and minimum biocidal concentration (MBC), anti-microbial tests were performed in micro-plates. Subsequently, the results indicated that the extracts were stable at different temperatures. The aqueous and methanolic extracts of the flowers of E. gilliesii had exhibited anti-microbial effects against important infectious microbes and could be introduced as an excellent source for anti-microbial agents.
 
 
Monireh Marsafari, Habibollah Samizadeh Lahiji, Babak Rabiei, Ali Ashraf Mehrabi, Yongkun Lv, Peng Xu,
Volume 7, Issue 2 (7-2020)
Abstract

Yarrowia lipolytica, as a good cell factory to speed up the production of plant pharmaceutical components, has been considered to be one of the most important and attractive micro-organisms in recent years, due to its high secretion capacity, limited glycosylation, large range of genetic markers and molecular tools. Naringenin, as a central core of flavonoids production, plays important roles both in plants and in the treatment of different types of human diseases. For this purpose, specific naringenin biosynthesis genes from different origins were selected and introduced after comparative expression profiling in Y. lipolytica. This research indicated that chs plays the main role in the production of naringenin, so the increase copy number of this gene in each construct was investigated. The HPLC results confirmed that the construct with 5 copy numbers of chs resulted in 7.14 fold increase of naringenin extracellular titer to 90.16 mg/L in shake flask cultures. The results reported in this study demonstrated that sufficient knowledge of genes involved in the specific biosynthesis pathway, synthetic gene pathway and using Y. lipolytica as a capable and cheap host could help bioengineers to produce significant amounts of pharmaceutical components.
 
 
Bijan Esmaeilnejad, Jamal Gharekhani, Awat Samiei, Hadi Rezaei,
Volume 7, Issue 3 (11-2020)
Abstract

Q fever is caused by Coxiella burnetii and is transmitted by more than 40 tick species. This study aimed to identify the tick species in goats of Meshkin-Shahr, Ardabil Province, Iran, and their role in the transmission of C. burnetii. A number of 365 goats were inspected for the infestation of hard ticks in a randomized sampling design, during a 1-year period from April 2013 to April 2014. A total number of 280 tick specimens were collected and identified and were then examined by molecular methods for the presence of C. burnetii infection. 40.8% of the infected animals had at least one species of tick. The goats which were studied were found to be infested by the following tick species: Hyalomma anatolicum anatolicum (33.9%), Rhipicephalus sanguineus (22.1%), Rhipicephalus turanicus (17.1%), Hyalomma excavatum (11.1%), Rhipicephalus bursa (5%), Hyalomma detritum (3.9%), Hyalomma dromedarii (3.6%), Hyalomma asiaticum asiaticum (1.8%), and Hyalomma marginatum (1%). There were no significant differences between the infestation rate in different seasons, genders and ages of the animals which were studied (p=0.05). The molecular assay of 280 tick specimens revealed the presence of C. burnetii infection in 5 out of 40 pool samples (6-8 tick individuals of the same species in each pool), including H. anatolicum anatolicum (3 pools), H. excavatum (1 pool) and R. sanguineus (1 pool). The present study, therefore, reports the rate of C. burnetii infection transmitted by hard ticks in North-West of Iran for the first time. According to the zoonotic aspect of Q fever, further studies on the carriers as well as other hosts of the infection were found to be necessary.
Farideh Attar, Hossein Maroofi,
Volume 7, Issue 4 (2-2021)
Abstract

In this article the collection of specimens related to Onosma sulaimanica from Kordestan Province, Iran, was confirmed and reported for the first time. Therefore, the species is recorded for the flora of Iran. This species is placed in the sect. Onosma, subsect. Onosma, ser. Wheeler-hainesii. A diagnostic key of related taxa belonging to series Wheeler-Hainesii and Aleppica, and the photos, micrographs and a distribution map of the species were also presented.
 
Manoj Kumar, Rakesh Ranjan, Amar Kumar, Manoranjan Prasad Sinha, Rohit Srivastava, Sweta Subarna, Samir Kumar Mandal,
Volume 7, Issue 4 (2-2021)
Abstract

Punica granatum leaf extracts have been used since time immemorial in traditional medicines. It is used for its antioxidant properties. Green nanoparticle synthesis is an emerging field which has opened an entirely different scope for medicinal formulations. It has been reported by many users that the green nanoparticles are more effective medicines as compared with their simple extracts. Thus, in order to evaluate these speculations, the present work was undertaken to assess the hepatoprotective activity of silver nanoparticles synthesized using aqueous leaf extract of Punica granatum in comparison with the aqueous extract. After CCl4 intoxication the serum bilirubin total increased significantly (p<0.05) and the total protein level decreased significantly (p<0.05) as compared with the control group; in addition, alkaline phosphatase activity, aspartate aminotransferase activity and alanine transaminase activity increased significantly (p<0.05). The CCl4 intoxicated rats were treated with aqueous leaf extract and synthesized nanoparticles, the results clearly revealed that the aqueous extract of Punica granatum showed hepatoprotective effect, as the liver profile altered by CCl4 toxicity, recovered to normal control values. Moreover, the nanoparticles synthesized using aqueous leaf extract of Punica granatum were comparatively more effective as hepatoprotective agent than the aqueous extract of Punica granatum.
 
 
 
Simin Kalouti, Shahrokh Kazempour-Osaloo, Farideh Attar, Alfonso Susanna, Núria Garcia-Jacas,
Volume 8, Issue 1 (6-2021)
Abstract

In this study, the phylogeny and morphological variation of 6 species of the genus Cousinia sect. Stenocephalae, i.e., C. hypopolia, C. decipiens, C. esfandiarii, C. renominata, C. stahliana and C. daryoushiana, distributed in NE regions of Iran, were investigated. ITS, ETS and rpl32-trnL (UAG) sequences for 12 species (17 specimens) were generated. Phylogenetic interspecies relationships were constructed by Bayesian method and likelihood analysis. The specimens were also investigated in terms of morphological characters. Despite very similar morphological characters and geographical distributions, the separation of these species was confirmed by the obtained results of the molecular data (combined data of plastid and nuclear sequences). On the basis of the present study, the above-mentioned species were almost separated from each other by morphological characters and molecular data. A diagnostic key and the description of these species were also presented. These results did not conform with the previous palynological and anatomical studies of the species.
 
Fatemeh Kaboudan, Soheila Talesh Sasani, Seyed Mohsen Asghari,
Volume 8, Issue 1 (6-2021)
Abstract

Breast cancer is the fourth common cancer worldwide and occurs when breast cells begin to uncontrolled division and tumor formation. Angiogenesis is one of the essential factors in cell growth and maintenance of homeostasis in the natural and pathological conditions, while VEGFs are the most critical factors in angiogenesis. MiR-210 plays an important role in the angiogenesis via association with VEGF. Here, the miR-210 expression changes in response to a VEGFB antagonist peptide, called VEGB1, was studied in female BALB/c mice bearing 4T1 cell line induced breast tumor. The treated group received 1mg.kg-1 and 10mg.kg-1 of the peptide and the control group received PBS intraperitoneally during two weeks. Both of the animal groups underwent a resection of breast tissue 14 days after treatment and miR-210 expression level was investigated. Statistical analysis by On-way ANOVA showed that the expression level of miR-210 gene had significant differences among the groups treated with various doses of VEGB1. Also, the gene expression was significantly different between peptide-treated groups and control samples (p<0.05). MiR-210 expression level had 42% reduction in mice treated with 1mg.kg-1 of VEGB1, while 90% was seen in mice treated with 10mg.kg-1 of VEGB1 showing the inhibitory function of VEGB1 antagonist peptide at different doses.
 
Kamran Almasieh, Kazem Negaresh, Mohammad Mahmoodi,
Volume 8, Issue 2 (7-2021)
Abstract

Centaurea glastifolia, a plant species from the Asteraceae family, is distributed in the Northwest of Iran. This study carried out to determine suitable habitats and habitat connectivity of Centaurea glastifolia in three Provinces of West Azarbayejan, East Azarbayejan and Ardabil. Seven habitat variables and 36 presence points were selected for habitat modelling using six habitat distribution models of GLM, GAM, MARS, MaxEnt, RF and GBM. The ensemble map resulting from these models was used for habitat connectivity modelling using electrical-circuit method. Results of habitat evaluation revealed that suitable habitats of the species studied were mainly located in West Azarbayejan and east of Ardabil Provinces, for which distance from agricultural lands, mean annual temperature and distance from rangelands had the highest contribution to the model. Habitat connectivity modelling showed that the current density movement was highest in West Azarbayejan. Current density movement between East and Southeast of Ardabil was evaluated to be significant, whereas the current density movement between West Azarbayejan and Ardabil Provinces was relatively low. The high current density movement in West Azarbayejan indicates the species’ high dispersal ability in expanding its range across the area. The results of the current study could facilitate understanding of the distribution and dispersal of Centaurea glastifolia.
 
 
Farshad Darvishi, Armin Kheirollahi Meidani,
Volume 8, Issue 3 (10-2021)
Abstract

Gamma-decalactone, an intramolecular 4-hydroxydecanoic acid ester, has a peach-like aroma and is widely used in the food and cosmetics industries. The biotechnological production of this compound is possible via biotransformation of castor seed oil by the yeast Yarrowia lipolytica. This study aimed to compare the production of gamma-decalactone by wild-type strain with that in a mutant strain producing lipase in high amounts. It was found that cells with yeast-like morphology produce more gamma-decalactone than hyphae-like cells. The maximum production of gamma-decalactone by wild-type and mutant strains was 65 mg/L after 24h of inoculation and 90 mg/L after 72h of inoculation, respectively. The mutant strain converts 38% more substrate into gamma-decalactone than the wild-type strain, therefore, it could significantly increase the productivity of industrial-scale production of gamma-decalactone.
 

 
Neshat Soosani, Morahem Ashengroph, ,
Volume 8, Issue 3 (10-2021)
Abstract

The biosynthesis of nanoparticles (NPs) has been proposed due to its fast, clean, safe, and cost-effective production and being efficient alternative to conventional physicochemical methods. This study aimed to isolate and identify aquatic yeast strains for their potential to form Zinc oxide nanoparticles (ZnONPs). A yeast strain, NS02, with high tolerance against zinc ion (5.25 mM) was isolated using the enrichment technique and was selected as efficient candidate for the biosynthesis of ZnONPs under cell-free extract (CFE) strategy. The preliminary evaluation on the formation of ZnONPs was performed by visual observation and UV-visible absorption spectra of the biosynthesized ZnONPs. The morphology, size and elemental distribution of the nanoparticles were determined by Field emission scanning electron microscopy (FESEM) equipped with energy-dispersive X-ray (EDX). X-ray diffractometer (XRD) was used to identify the crystalline phase of the ZnONPs. Antibacterial activity of ZnONPs against pathogenic bacteria isolated from the clinical specimens was investigated using agar well diffusion method. The isolate NS02 was characterized based on their morphological properties and amplification the ITS-5.8S-ITS2 rDNA regions. The present study pioneered the capabilities of the native aquatic strain Rhodotorula pacifica for the extracellular synthesis of ZnONPs with CFE strategy. The biosynthesized ZnONPs had a growth inhibitory effect all tested clinical isolates due to their nanometric size and well-defined dispersity. This investigation is attempted to indicate the novel microbial sources of aquatic yeasts as biological plant in the synthesis of ZnONPs with antimicrobial activity under cell-free extract strategy.
 


Hiba Zedan, Seyed Masoud Hosseini, Ali Mohammadi,
Volume 9, Issue 1 (3-2022)
Abstract

The aim of this study was to increase the shelf life of traditional yogurt, to improve its consistency and to prevent whey syneresis by adding tarragon essential oil. Yogurt was produced by industrial procedures and then the essential oil was inoculated into yogurt in different concentrations (10, 25, 30 ppm). Samples were examined for water storage capacity and microbial evaluation during 3 weeks of storage at two temperatures (refrigerator temperature and room temperature). The results showed that different concentrations of tarragon, temperature and storage time had a significant effect (p <0.05) on water holding capacity as well as the number of starter bacteria, molds, and yeasts. Tarragon essential oil reduced the number of bacteria, molds, and yeasts that spoil yogurt. The final results showed that the use of tarragon was not effective in water retention of yogurt samples, but it affected the number of initiator bacteria and yeast. Yogurt samples with high concentration of tarragon had the highest score in terms of consistency and sour taste. While samples with low concentration of tarragon, in terms of yogurt taste, had the highest sensory score.
 
Mahmoud Bidarlord, Mohamad Dehdar Dargahi, Adel Jalili,
Volume 10, Issue 1 (6-2023)
Abstract

Solanum chenopodioides is introduced here as a new record for the flora of Iran from the coastal areas of the Caspian Sea, Guilan province. This species grows in Bujagh National Land-Sea Park, on sand dunes, along with other coastal psammophytic plants. This species belongs to the Morelloid clade. It differs from the related species S. nigrum, by its shrubby nature, perfect leaves margin, dull berries, bi-colored petals in the middle, and peduncle that bends a bit downwards in fruit. This plant is native to southern South America. It is introduced as a common weed all over the world; in addition, this species is considered an alien species for the flora of Iran. Transit of goods, especially wool, to the different parts of the world is one of the ways of the spread of this species all over the world. In addition to providing some pictures of the plant, some notes about the distribution and ecology of this species were also provided in this paper. The numerous reports of alien species from Bujagh National Park in recent years could be regarded as a credible warning for the stability of native vegetation of the area and existing ecosystems.



Leila Gholami, Farnoosh Attari, Mahmood Talkhabi, Fatemeh Saadatpour,
Volume 10, Issue 1 (6-2023)
Abstract

Breast cancer is the most common cause of death from cancer among women. The triple-negative breast cancer (TNBC) is the most invasive subtype, and chemotherapy is the only therapy option. Cancer cells preferably utilize the glycolysis pathway even with proper oxygen availability, and this activation plays a great role in tumorigenesis. Therefore, glycolysis targeting can be an effective strategy for cancer treatment. Here, the apoptotic effect of a glycolysis inhibitor named dichloroacetate (DCA) on TNBC cells MDA-MB-231 was assessed, and the expression of anti-apoptotic genes and oncogenic miRNAs was evaluated. MTT assay showed that DCA reduces cell viability in a dose-dependent manner with the IC50 concentration of 50 mM. Annexin/PI assay demonstrated that DCA due to DCA treatment. Finally, the expression of anti-apoptotic genes Bcl2l1 and Mcl1 and oncogenic miRNAs miR21 and miR27a decreased due to DCA treatment. Our results confirmed that DCA, as a glycolysis inhibitor, leads to apoptosis induction in TNBC cells because of reducing expression of viability genes and miRNAs.

Mostafa Hosseinpour, Mohammad Mohammadi, Gholam Reza Ghezelbash,
Volume 10, Issue 3 (12-2023)
Abstract

Biological cementation is a new process in which urea hydrolysis bacteria or free urease enzyme decompose urea and increases the pH of the environment and chemical interactions in the presence of calcium ions to form calcite. Nowadays, nano-calcite is widely used in engineering, such as increasing the strength of soil and concrete, as well as in medicine, such as drug delivery and cancer treatment. This study aimed to investigate the laboratory conditions for producing nano-calcite particles with appropriate quality, size and purity by Sporosarcina pasteurii enzyme extract for use in medical and engineering studies. This investigation aimed to make calcite by S. pasteurii enzyme extract and optimize influential factors in calcite production. For this purpose, the bacterium S. pasteurii was cultured in nutrient broth containing urea and nickel, and upon reaching the appropriate time, the cells were separated and washed. Then, their enzyme extract was prepared by sonication, and calcite precipitation was studied in different amounts of urea, calcium chloride, enzyme and temperature. The quality of produced calcite crystals and their ratio compared to other crystals were investigated by XRD and SEM analyses. According to the results of XRD analysis, it was found that in 0.5 M urea and 0.25 M calcium chloride, the highest amount of calcite is produced with 96%, and the least side products are produced. Examining the particle size histogram in the sample containing 0.5 M urea and 0.25 M calcium chloride revealed that the range of particles were between 50 and 100 nm. The nature and type of crystals were studied by electron microscopy, and EDX analysis showed the presence of calcium, oxygen, and carbon. According to the results, it was found that by the increase of the concentrations of urea and calcium, the range of particle size became larger. Also, the percentage of calcite produced in low urea and calcium chloride concentrations is higher than those in high concentrations.

Elham Ahmadi, Nasim Aghaei Delche,
Volume 10, Issue 4 (3-2024)
Abstract

       Continuous environmental monitoring is one of the important principles of management and is environmental assessment axis, and molluscs are one of the biological indicators of ecosystem quality. For this purpose, snails and slugs were collected and identified in the east of Tehran province which during it according to the availability, habitat diversity and geomorphological differences in more than 3251 samples from five microclimates were collected and identified. Specimens were gathered by hand, sweeping net and other techniques from aquatic plants, rotten underwood, shrubs and weeds, their geograical and regional properties were recorded and transfered to laboratory. Then through available morphological identification keys, specimens were identified as 19 species belonging to 13 genera and 10 families based on morphometric characteristics, including (shape and size of operculum, aperture, dextral or sinistral profile of their shell, pneumostome, keel, radula, renal ridge and reproduction system) and the comparison of photos and the identification key of these taxons were prepared and discussed:
Bithynia tentaculata (Linnaeus, 1758), Physella acuta (Draparnaud,1805), Lymnaea truncatula (Müller, 1774), , Lymnaea palusris (Müller, 1774) , Lymnaea pereger (Müller, 1774) , Lymnaea gedrosiana (Annandale and Prashad, 1919), Planorbis planorbis (Linnaeus, 1758), Gyraulus euphraticus(Mousson, 1874), Gyraulus convexiusculus (Hutton, 1849), Succinea putris (Linnaeus, 1758), Helicella krynickii (Krynicki, 1833), Helicella derbentina(Krynicki, 1836), Caucasotachea atrolabiata (Krynicki, 1833), * Monacha cartusiana (Müller, 1774), Oxychilus herzi (Boettger, 1889), Agriolimax agrestis=Deroceras reticulatum (Müller, 1774), *Theba pisana (Müller, 1774), Parmacella ibera Eichwald, 1841, Planorbis carinatus Müller, 1774.
Two species marked with an asterisk are new records for Iranian mollusc fauna. In this study, among the samples collected, the largest families in terms of species diversity are Planorbidae with four species (Planorbis planorbis, Gyraulus euphraticus, Gyraulus convexiusculus, Planorbis carinatus), Lymnaeidae with four species (Lymnaea truncatula, Lymnaea gedrosiana, Lymnaea palustris, Lymnaea pereger) and Helicidae with four species: Helicella krynickii, Helicella derbentina, Caucasotachea atrolabiata, Theba pisana. The highest and lowest species diversity among the identified species with 18 and 5 species are related to stations 4 and 5 of the investigated areas respectively. The whole collection will be kept permanently in the Zoology Museum of Iranian Research Institute of Plant Protection.

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